smartem_backend.model.mq_event

Members

AcquisitionCreatedEvent	Event emitted when an acquisition is created
AcquisitionDeletedEvent	Event emitted when an acquisition is deleted
AcquisitionEventBase	Base model for acquisition events
AcquisitionUpdatedEvent	Event emitted when an acquisition is updated
AtlasCreatedEvent	Event emitted when an atlas is created
AtlasDeletedEvent	Event emitted when an atlas is deleted
AtlasEventBase	Base model for atlas events
AtlasTileCreatedEvent	Event emitted when an atlas tile is created
AtlasTileDeletedEvent	Event emitted when an atlas tile is deleted
AtlasTileEventBase	Base model for atlas tile events
AtlasTileUpdatedEvent	Event emitted when an atlas tile is updated
AtlasUpdatedEvent	Event emitted when an atlas is updated
CtfCompleteBody	Create a new model by parsing and validating input data from keyword arguments.
CtfStartBody	Create a new model by parsing and validating input data from keyword arguments.
FoilHoleCreatedEvent	Event emitted when a foil hole is created
FoilHoleDeletedEvent	Event emitted when a foil hole is deleted
FoilHoleEventBase	Base model for foil hole events
FoilHoleModelPredictionEvent	Create a new model by parsing and validating input data from keyword arguments.
FoilHoleUpdatedEvent	Event emitted when a foil hole is updated
GenericEventMessageBody	Create a new model by parsing and validating input data from keyword arguments.
GridCreatedEvent	Event emitted when a grid is created
GridDeletedEvent	Event emitted when a grid is deleted
GridEventBase	Base model for grid events
GridRegisteredEvent	Event emitted when all squares at atlas mag have been registered for a grid
GridSquareCreatedEvent	Event emitted when a grid square is created
GridSquareDeletedEvent	Event emitted when a grid square is deleted
GridSquareEventBase	Base model for grid square events
GridSquareModelPredictionEvent	Create a new model by parsing and validating input data from keyword arguments.
GridSquareRegisteredEvent	Event emitted when all holes at square mag have been registered for a grid square
GridSquareUpdatedEvent	Event emitted when a grid square is updated
GridUpdatedEvent	Event emitted when a grid is updated
MessageQueueEventType	Enum listing various system events that are mapped to messages in RabbitMQ
MicrographCreatedEvent	Event emitted when a micrograph is created
MicrographDeletedEvent	Event emitted when a micrograph is deleted
MicrographEventBase	Base model for micrograph events
MicrographUpdatedEvent	Event emitted when a micrograph is updated
ModelParameterUpdateEvent	Create a new model by parsing and validating input data from keyword arguments.
MotionCorrectionCompleteBody	Create a new model by parsing and validating input data from keyword arguments.
MotionCorrectionStartBody	Create a new model by parsing and validating input data from keyword arguments.
ParticlePickingCompleteBody	Create a new model by parsing and validating input data from keyword arguments.
ParticlePickingStartBody	Create a new model by parsing and validating input data from keyword arguments.
ParticleSelectionCompleteBody	Create a new model by parsing and validating input data from keyword arguments.
ParticleSelectionStartBody	TODO For particle selection start see: DiamondLightSource/cryoem-services class ParticleSelectionStart(BaseModel): input_file: str = Field(..., min_length=1) batch_size: int image_size: int incomplete_batch_size: int = 10000 relion_options: RelionServiceOptions
non_negative_float

class smartem_backend.model.mq_event.MessageQueueEventType(*values)

Enum listing various system events that are mapped to messages in RabbitMQ

class smartem_backend.model.mq_event.AcquisitionEventBase(*, event_type: MessageQueueEventType)

Base model for acquisition events

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AcquisitionCreatedEvent(*, event_type: MessageQueueEventType, uuid: str, id: str | None = None)

Event emitted when an acquisition is created

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AcquisitionUpdatedEvent(*, event_type: MessageQueueEventType, uuid: str, id: str | None = None)

Event emitted when an acquisition is updated

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AcquisitionDeletedEvent(*, event_type: MessageQueueEventType, uuid: str)

Event emitted when an acquisition is deleted

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AtlasEventBase(*, event_type: MessageQueueEventType)

Base model for atlas events

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AtlasCreatedEvent(*, event_type: MessageQueueEventType, uuid: str, id: str | None = None, grid_uuid: str | None = None)

Event emitted when an atlas is created

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AtlasUpdatedEvent(*, event_type: MessageQueueEventType, uuid: str, id: str | None = None, grid_uuid: str | None = None)

Event emitted when an atlas is updated

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AtlasDeletedEvent(*, event_type: MessageQueueEventType, uuid: str)

Event emitted when an atlas is deleted

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AtlasTileEventBase(*, event_type: MessageQueueEventType)

Base model for atlas tile events

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AtlasTileCreatedEvent(*, event_type: MessageQueueEventType, uuid: str, id: str | None = None, atlas_uuid: str | None = None)

Event emitted when an atlas tile is created

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AtlasTileUpdatedEvent(*, event_type: MessageQueueEventType, uuid: str, id: str | None = None, atlas_uuid: str | None = None)

Event emitted when an atlas tile is updated

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.AtlasTileDeletedEvent(*, event_type: MessageQueueEventType, uuid: str)

Event emitted when an atlas tile is deleted

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridEventBase(*, event_type: MessageQueueEventType)

Base model for grid events

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridCreatedEvent(*, event_type: MessageQueueEventType, uuid: str, acquisition_uuid: str | None = None)

Event emitted when a grid is created

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridUpdatedEvent(*, event_type: MessageQueueEventType, uuid: str, acquisition_uuid: str | None = None)

Event emitted when a grid is updated

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridDeletedEvent(*, event_type: MessageQueueEventType, uuid: str)

Event emitted when a grid is deleted

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridRegisteredEvent(*, event_type: MessageQueueEventType, grid_uuid: str)

Event emitted when all squares at atlas mag have been registered for a grid

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridSquareEventBase(*, event_type: MessageQueueEventType)

Base model for grid square events

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridSquareCreatedEvent(*, event_type: MessageQueueEventType, uuid: str, grid_uuid: str | None = None, gridsquare_id: str | None = None)

Event emitted when a grid square is created

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridSquareUpdatedEvent(*, event_type: MessageQueueEventType, uuid: str, grid_uuid: str | None = None, gridsquare_id: str | None = None)

Event emitted when a grid square is updated

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridSquareDeletedEvent(*, event_type: MessageQueueEventType, uuid: str)

Event emitted when a grid square is deleted

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.GridSquareRegisteredEvent(*, event_type: MessageQueueEventType, uuid: str, grid_uuid: str | None = None)

Event emitted when all holes at square mag have been registered for a grid square

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.FoilHoleEventBase(*, event_type: MessageQueueEventType)

Base model for foil hole events

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.FoilHoleCreatedEvent(*, event_type: MessageQueueEventType, uuid: str, foilhole_id: str | None = None, gridsquare_uuid: str | None = None, gridsquare_id: str | None = None)

Event emitted when a foil hole is created

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.FoilHoleUpdatedEvent(*, event_type: MessageQueueEventType, uuid: str, foilhole_id: str | None = None, gridsquare_uuid: str | None = None, gridsquare_id: str | None = None)

Event emitted when a foil hole is updated

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.FoilHoleDeletedEvent(*, event_type: MessageQueueEventType, uuid: str)

Event emitted when a foil hole is deleted

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.MicrographEventBase(*, event_type: MessageQueueEventType)

Base model for micrograph events

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.MicrographCreatedEvent(*, event_type: MessageQueueEventType, uuid: str, foilhole_uuid: str | None = None, foilhole_id: str | None = None, micrograph_id: str | None = None)

Event emitted when a micrograph is created

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.MicrographUpdatedEvent(*, event_type: MessageQueueEventType, uuid: str, foilhole_uuid: str | None = None, foilhole_id: str | None = None, micrograph_id: str | None = None)

Event emitted when a micrograph is updated

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.MicrographDeletedEvent(*, event_type: MessageQueueEventType, uuid: str)

Event emitted when a micrograph is deleted

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.

class smartem_backend.model.mq_event.ParticleSelectionStartBody(*, event_type: MessageQueueEventType, micrograph_uuid: str)

TODO For particle selection start see: DiamondLightSource/cryoem-services class ParticleSelectionStart(BaseModel):

input_file: str = Field(…, min_length=1) batch_size: int image_size: int incomplete_batch_size: int = 10000 relion_options: RelionServiceOptions

Create a new model by parsing and validating input data from keyword arguments.

Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.

self is explicitly positional-only to allow self as a field name.