tomopy.prep.alignment

tomopy.prep.alignment#

https://tomopy.readthedocs.io/en/stable/api/tomopy.prep.alignment.html

Download all yaml templates

distortion_correction_proj.yaml

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🔗 Link to distortion_correction_proj function description

- method: distortion_correction_proj
  module_path: tomopy.prep.alignment
  parameters:
    xcenter: REQUIRED
    ycenter: REQUIRED
    list_fact: REQUIRED
add_noise.yaml

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🔗 Link to add_noise function description

- method: add_noise
  module_path: tomopy.prep.alignment
  parameters:
    ratio: 0.05
align_seq.yaml

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🔗 Link to align_seq function description

- method: align_seq
  module_path: tomopy.prep.alignment
  parameters:
    fdir: .
    iters: 10
    pad: !!python/tuple
    - 0
    - 0
    blur: true
    center: ${{centering.side_outputs.centre_of_rotation}}
    algorithm: sirt
    upsample_factor: 10
    rin: 0.5
    rout: 0.8
    save: false
    debug: true
add_jitter.yaml

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🔗 Link to add_jitter function description

- method: add_jitter
  module_path: tomopy.prep.alignment
  parameters:
    low: 0
    high: 1
distortion_correction_sino.yaml

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🔗 Link to distortion_correction_sino function description

- method: distortion_correction_sino
  module_path: tomopy.prep.alignment
  parameters:
    ind: REQUIRED
    xcenter: REQUIRED
    ycenter: REQUIRED
    list_fact: REQUIRED
scale.yaml

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🔗 Link to scale function description

- method: scale
  module_path: tomopy.prep.alignment
  parameters: {}
shift_images.yaml

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🔗 Link to shift_images function description

- method: shift_images
  module_path: tomopy.prep.alignment
  parameters:
    sx: REQUIRED
    sy: REQUIRED
blur_edges.yaml

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🔗 Link to blur_edges function description

- method: blur_edges
  module_path: tomopy.prep.alignment
  parameters:
    low: 0
    high: 0.8
align_joint.yaml

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🔗 Link to align_joint function description

- method: align_joint
  module_path: tomopy.prep.alignment
  parameters:
    fdir: ./
    iters: 10
    pad: !!python/tuple
    - 0
    - 0
    blur: true
    center: ${{centering.side_outputs.centre_of_rotation}}
    algorithm: sirt
    upsample_factor: 10
    rin: 0.5
    rout: 0.8
    save: false
    debug: true